chore: update node_modules with new binary files and dependencies

- Add new binary files for nodemon, onnxruntime-web, and xenova/transformers
- Update various JavaScript and TypeScript files in node_modules
- Remove unused files and dependencies
- Add new test fixtures and documentation files

node_modules/protobufjs/cli/lib/tsd-jsdoc.json

@@ -0,0 +1,18 @@
+{
+    "tags": {
+        "allowUnknownTags": false
+    },
+    "plugins": [
+        "./tsd-jsdoc/plugin"
+    ],
+    "opts": {
+        "encoding"      : "utf8",
+        "recurse"       : true,
+        "lenient"       : true,
+        "template"      : "./tsd-jsdoc",
+
+        "private"       : false,
+        "comments"      : true,
+        "destination"   : false
+    }
+}